They show their barrel length at 6 1/2 inches and max load at 6.2 and 6.5 3N37 for 158gr bullets with velocities over 1000 fps.
http://www.lapua.com/en/products/rel.../relodata/6/28
The velocity would be less of a concern than the erratic results. They likely have a SAAMI minimum chamber and you do not, thus lower velocity.
I doubt that less than 1/8 turn crimp is going to have a dramatic effect. I'm inclined to believe that less flare would make more difference but that's obviously just a guess.
What is your OAL compared to their data? That can also have a large effect.